PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00472.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bZIP
Protein Properties Length: 152aa    MW: 16657.7 Da    PI: 6.5086
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00472.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.89.7e-131875461
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                       ++ +r+++NRe+ArrsR RK++ ++ L+ ++  +++eN +    ++   +++ ++++
  Migut.N00472.1.p 18 QRKRKRMESNRESARRSRVRKQKHLDDLTAEISRMSKENNQISISVNVTAQHCVSVEA 75
                      568899***********************************99999988888877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-141579IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-91694No hitNo description
PROSITE profilePS502179.9791759IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-111970No hitNo description
PfamPF001707.0E-101970IPR004827Basic-leucine zipper domain
CDDcd147028.21E-162070No hitNo description
PROSITE patternPS0003602237IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MESLSAAEED LLRPVADQRK RKRMESNRES ARRSRVRKQK HLDDLTAEIS RMSKENNQIS  60
ISVNVTAQHC VSVEAANSVL RAQMMELTQR LHSLNEILDF IHCSAAAAAA EAAAAAAVGG  120
CVFGAEGFQH QGFADNQQHP IMASAEMIDY Y*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11839RKRKRMESNRESARRSRVRKQK
23137RRSRVRK
33138RRSRVRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00472.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843020.11e-107PREDICTED: ocs element-binding factor 1-like
SwissprotC0Z2L52e-41BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A022R2503e-54A0A022R250_ERYGU; Uncharacterized protein
TrEMBLA0A2G9HZS23e-54A0A2G9HZS2_9LAMI; Uncharacterized protein
STRINGMigut.N00472.1.p1e-107(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-40basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]