PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N00619.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 333aa MW: 37440.9 Da PI: 8.4397

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N00619.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.8	3.4e-19	41	123	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf...erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++e+laLi+a++e++ +l++g+lk +Wee s + ++ gf +r+++qC++k+e+l+kry+ + + + +++pyf+ ++ Migut.N00619.1.p 41 WSHDETLALIQAYQEKWYSLKKGQLKSFQWEELSVTVaARCGFdepTRTSTQCRHKIEKLRKRYRSELQKPNP------NSWPYFELMD 123 ******************************999986566776668**************99888776......35***998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.3E-20	40	125	No hit	No description
PROSITE profile	PS50090	6.493	40	101	IPR017877	Myb-like domain
SMART	SM00595	5.8E-6	48	130	IPR006578	MADF domain

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MASPPSSPPP PQSYPLSPNP ESIPTSSKST STPKKSAAFP WSHDETLALI QAYQEKWYSL 60 KKGQLKSFQW EELSVTVAAR CGFDEPTRTS TQCRHKIEKL RKRYRSELQK PNPNSWPYFE 120 LMDHMRRGPM PLSACPISAF KSNSYNNSNN VNHSYGGSYS GSVDYCFNNN NNQSDVGGSD 180 DSDEEWNAAA AKKNKSKSIN NIVHRDGKRV AVEQDFNGEG SRVVRGLRNV TNGKRKQYCD 240 DVDDDVDEEL QVEEQVEEGD GGMKLAEGIR GVAEKFMEME NRKIEMMRKT GIHWMEMEKK 300 RIAMILEGQK KILNLIGSAF GANKKSKMAH ES*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N00619.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012833535.1	0.0	PREDICTED: trihelix transcription factor ASIL1-like
TrEMBL	A0A2G9G4T7	1e-105	A0A2G9G4T7_9LAMI; Transcription factor GT-2
STRING	Migut.N00619.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12466	15	16

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24860.1	2e-28	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Migut.N00619.1.p