PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N00633.1.p

Common Name

LOC105954424, MIMGU_mgv1a013855mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ERF

Protein Properties

Length: 209aa MW: 24116.1 Da PI: 10.2208

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N00633.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.6	1.2e-11	96	137	3	51
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV+++ + +W A I++ rk+++lg+ t+eeAa+++++a+ Migut.N00633.1.p 96 MRGVYYK--NRKWQAAIKVD-----RKQIHLGTVSTEEEAARLYDRAAF 137 79985..56****4.....5******************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	8.9	84	150	IPR001471	AP2/ERF domain
SMART	SM00380	1.4E-4	95	154	IPR001471	AP2/ERF domain
Pfam	PF00847	2.5E-5	96	138	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	6.08E-9	96	139	IPR016177	DNA-binding domain
Gene3D	G3DSA:3.30.730.10	2.2E-7	97	141	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence Send to blast
MVSIRRRRLL GLCSSIQGKN SVLDPVPRVL EHGHTPLPLN DDYKPKHETS LENEHGSPDL 60 SSSSPSKEHP FRQFPEVKRR KRHRRKQVQN QEPCTMRGVY YKNRKWQAAI KVDRKQIHLG 120 TVSTEEEAAR LYDRAAFMCG REPNTVISEE EKEELRKYKW DEFLAMTRSS ITNKKVQRRT 180 GSGSRRKSQN DEHGYSGLSA SEDDIFAP*

Functional Description ? help Back to Top
Source	Description
UniProt	Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N00633.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012833547.1	1e-155	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
Refseq	XP_012833548.1	1e-155	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
Refseq	XP_012833549.1	1e-155	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
Swissprot	Q56XP9	2e-34	ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBL	A0A022RKB2	1e-154	A0A022RKB2_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6246	24	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13040.2	1e-43	ERF family protein

Link Out ? help Back to Top
Phytozome	Migut.N00633.1.p
Entrez Gene	105954424