PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N00674.1.p

Common Name

LOC105954404, MIMGU_mgv1a013594mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

FAR1

Protein Properties

Length: 217aa MW: 25227.8 Da PI: 10.1609

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N00674.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.1	9.6e-31	45	132	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GF++r+++ ++s r+g +++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw+vtk+ +eHnH+l+ Migut.N00674.1.p 45 FYDAYATHMGFTMRVDAFRRSMRDGGVVWRRLVCNKEGFRKSRPKR-SENRKPRAITREGCKAMMVVKKEKTGKWVVTKFFKEHNHPLV 132 9*****************************************99.9*************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.8E-28	45	132	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MDDNEAEMLG ISMVNDFLVN NNEGNSDREP YVDMEFDSEE AAKVFYDAYA THMGFTMRVD 60 AFRRSMRDGG VVWRRLVCNK EGFRKSRPKR SENRKPRAIT REGCKAMMVV KKEKTGKWVV 120 TKFFKEHNHP LVFAPVNARR SAQLSQTPDE KDMKIRELTA ELQRERKRSS ALQQQLNSIL 180 KDMDEHFKHL SRNITNIVES VNEIESRRPI TAIRKS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N00674.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012833526.1	1e-161	PREDICTED: protein FAR1-RELATED SEQUENCE 12
TrEMBL	A0A022RP09	1e-160	A0A022RP09_ERYGU; Uncharacterized protein
STRING	Migut.N00674.1.p	1e-161	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12791	15	20

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	2e-88	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Migut.N00674.1.p
Entrez Gene	105954404