PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00873.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 404aa    MW: 46339.6 Da    PI: 6.1273
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00873.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.24e-50521772128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp  ++ +ekewyf+++rd+ky++g+r+nr+t+sgyWkatg d+++ s
  Migut.N00873.1.p  52 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRSIRS 143
                       79***************************.89***************8777899*************************************** PP

               NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ + +glkktLvfy+g+apkg +t+W+m+eyrl
  Migut.N00873.1.p 144 ENLRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 177
                       ********************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100555.91251198IPR003441NAC domain
SuperFamilySSF1019419.94E-5651197IPR003441NAC domain
PfamPF023653.5E-2553177IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MNNNNNNKNN QEESNSIISS NINISVHNNN NDINNKQDDQ EQENDHDEEM VMPGFRFHPT  60
EEELVEFYLR RKVEGKRFNV ELITFLDLYR YDPWELPGLA AIGEKEWYFY VPRDRKYRNG  120
DRPNRVTTSG YWKATGADRS IRSENLRSIG LKKTLVFYSG KAPKGIRTSW IMNEYRLPLH  180
ETERLQKAEI SLCRVYKRAG VEDHHSLPST SSSQQTRNQN EPENREIGRS KSQQKDGKKA  240
KITSTNYNNN TKNINNIALQ NQITNNSYTT IPPPSPTSLQ EEEANIIICH SSSLSQNCPS  300
SILFNTNNNN NDSNNSSINP NIDDDLHKLV NINYSSQQSA SLLTNNNDNN NLENNNNNPQ  360
YPNNNNVLPE FSSSLQPPAG FADRLWDWNS ISEANKDFTN LFK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-55421987165NO APICAL MERISTEM PROTEIN
1ut4_B1e-55421987165NO APICAL MERISTEM PROTEIN
1ut7_A1e-55421987165NO APICAL MERISTEM PROTEIN
1ut7_B1e-55421987165NO APICAL MERISTEM PROTEIN
3swm_A2e-554219810168NAC domain-containing protein 19
3swm_B2e-554219810168NAC domain-containing protein 19
3swm_C2e-554219810168NAC domain-containing protein 19
3swm_D2e-554219810168NAC domain-containing protein 19
3swp_A2e-554219810168NAC domain-containing protein 19
3swp_B2e-554219810168NAC domain-containing protein 19
3swp_C2e-554219810168NAC domain-containing protein 19
3swp_D2e-554219810168NAC domain-containing protein 19
4dul_A1e-55421987165NAC domain-containing protein 19
4dul_B1e-55421987165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00257DAPTransfer from AT2G02450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00873.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012842307.10.0PREDICTED: putative NAC domain-containing protein 94
TrEMBLA0A022R3950.0A0A022R395_ERYGU; Uncharacterized protein
STRINGMigut.N00873.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA38882446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-106NAC domain containing protein 35