PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00974.1.p
Common NameLOC105960206, MIMGU_mgv1a010807mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 302aa    MW: 34841.9 Da    PI: 7.7539
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00974.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00041159183123
                       EEETTTTEEESSHHHHHHHHHH..T CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                       + C+ C+k ++  ++++ H+++  H
  Migut.N00974.1.p 159 FYCELCNKQYKLAMEFEAHLSSydH 183
                       79*****************987555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004435.1E-1962107IPR000467G-patch domain
PROSITE profilePS5017417.46964109IPR000467G-patch domain
PfamPF015854.1E-1665105IPR000467G-patch domain
SuperFamilySSF576673.69E-5157189No hitNo description
PfamPF121716.4E-6159186IPR022755Zinc finger, double-stranded RNA binding
PROSITE patternPS000280161183IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDGKWYSGKQ EMHNKRQDKK DEAYNATVLE DLAEDFRLPI NHRITENVDL DNVEQASLDT  60
RITSSNVGYR LLQKMGWRGK GLGKNEQGIV EPIKSGIRDA RLGLGKQEED DFFTAEENIQ  120
RRKLDIEFEE TEELAKKREV VAEREQKIQT EVKEIRKVFY CELCNKQYKL AMEFEAHLSS  180
YDHNHRKRFK QMRDMHGSSS RDDRQKREQQ RHEKEMAKFL QMADVHKQQQ QQTQNQEESG  240
THTAPPAVTS GATKVTDQDQ RKVLKFGFSA KGSAVKSSVS NTTKKPKVAI ASIFSNDSDE  300
E*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00974.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839831.10.0PREDICTED: G patch domain-containing protein 8
TrEMBLA0A022R5U60.0A0A022R5U6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA86041415