PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01145.1.p
Common NameLOC105956063, MIMGU_mgv1a019013mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 235aa    MW: 23965 Da    PI: 7.2499
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01145.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.001887106120
                       EEETTTTEEESSHHHHHHHH CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                       ++C++Cg+ F++   L  H 
  Migut.N01145.1.p  87 HTCNICGRGFPSYQALGGHK 106
                       79*********988887665 PP
2zf-C2H213.40.00023141163123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C  Cg+sF++   L  H r+H
  Migut.N01145.1.p 141 HTCATCGESFPSGQALGGHKRRH 163
                       79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.11E-786109No hitNo description
SMARTSM003550.2587109IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.45287114IPR007087Zinc finger, C2H2
PfamPF139121.1E-887109IPR007087Zinc finger, C2H2
PROSITE patternPS00028089109IPR007087Zinc finger, C2H2
SuperFamilySSF576671.11E-7136163No hitNo description
SMARTSM003550.41141163IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.64141163IPR007087Zinc finger, C2H2
PfamPF139123.1E-11141164IPR007087Zinc finger, C2H2
PROSITE patternPS000280143163IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MCAEDFNSAA ANTPPTKRRR DDGDNYESED MYIASLLVAL SQRGDGPSSS AAEAQNQTEP  60
STSAAVNQTE YSPSTGHHPP PSQDNCHTCN ICGRGFPSYQ ALGGHKTGHT KLSAAVSNKR  120
KNSTAAVEDG RHNPTNGARL HTCATCGESF PSGQALGGHK RRHYPGVIRG GGGRSGGSAS  180
EVDGGGGTSG VTSSSGDGAS SISAGVSAAA PVRWNFDMNF PPPPPGGLDL TLRL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01145.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835339.11e-171PREDICTED: zinc finger protein 1-like
TrEMBLA0A022RJK21e-170A0A022RJK2_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.22e-21zinc-finger protein 2