PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N01146.1.p

Common Name

MIMGU_mgv1a020243mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

C2H2

Protein Properties

Length: 161aa MW: 17257.4 Da PI: 8.9305

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N01146.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.1	0.00029	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+Fs+ L H tH Migut.N01146.1.p 61 HECSICHKVFSTGQALGGHKTTH 83 78**********99999998888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	5.12E-6	58	86	No hit	No description
Pfam	PF13912	9.3E-13	60	84	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	9.224	61	88	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	63	83	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MKLKIIPPRR PDIVTDDEIV AVEVLMMLAS GKDFSSPPSD SQTTTNRSDA ASDQNRSGRA 60 HECSICHKVF STGQALGGHK TTHRNTIKFK SSHGGPPCNS PTPIPAPKTV ISINDNISLK 120 KRKRNNNSDS SDEAASTWVA RSIDLNLPPE PEFSPSAAII *

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N01146.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012835316.1	1e-114	PREDICTED: zinc finger protein AZF1-like
TrEMBL	A0A022RGD3	1e-111	A0A022RGD3_ERYGU; Uncharacterized protein (Fragment)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49930.1	4e-11	C2H2 family protein

Link Out ? help Back to Top
Phytozome	Migut.N01146.1.p