PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01674.1.p
Common NameLOC105952376, MIMGU_mgv1a014840mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 177aa    MW: 19387.3 Da    PI: 6.2685
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01674.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.53.2e-1558147196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+ vl++s+ + +  l +p + ++e       ++  +l+   g+ W++ +  ++++ r  l +GWk Fv +n+Lk gD +vF+l+++++++lv
  Migut.N01674.1.p  58 FDLVLSKSHISHTFGLLFPASMIRELPRA---TIPAVLK-NGGKIWNMSY--CGGGVRPKLDSGWKTFVADNNLKIGDGCVFELMESTGTNLV 144
                       56678888888888888888888887432...3335555.59********..*********************************99999999 PP

                       EEE CS
                B3  94 vkv 96 
                       +kv
  Migut.N01674.1.p 145 FKV 147
                       987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.14E-1754145IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.103.0E-1554151IPR015300DNA-binding pseudobarrel domain
CDDcd100172.91E-1856151No hitNo description
PfamPF023622.8E-1358147IPR003340B3 DNA binding domain
PROSITE profilePS5086312.06958153IPR003340B3 DNA binding domain
SMARTSM010198.4E-1058153IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
MVTPSKRVAQ LAAVKMEACT TENAPENEEI RHTRFGSNSE PAKLDEDEIR YLSGKPYFDL  60
VLSKSHISHT FGLLFPASMI RELPRATIPA VLKNGGKIWN MSYCGGGVRP KLDSGWKTFV  120
ADNNLKIGDG CVFELMESTG TNLVFKVMIV RGDIPTELQE LIDSRGKSGD TPIVLD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01674.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831373.11e-129PREDICTED: B3 domain-containing protein Os04g0386900-like
TrEMBLA0A022RTK11e-128A0A022RTK1_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-08B3 family protein