PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01685.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 473aa    MW: 52937.2 Da    PI: 6.0605
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01685.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.7e-13280326354
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++h + Er RR  +N++f+ Lr+l+P++      K + a+i+  A++YI++L
  Migut.N01685.1.p 280 TKHFATERHRRLLLNDKFQALRKLIPNP-----SKDDRASIVGDAINYINEL 326
                       78*************************9.....7***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.202277326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.91E-14278344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-13280337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.19E-9280331No hitNo description
PfamPF000102.6E-10280326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-9283332IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MPPLLQFLCL LSSRYKHIST KYNNTHKKTN MYEQSSDFDQ TMNLHEQEEG GGLMGQNDVV  60
NYPIISNQEV AAMEMELHHQ LNLEIEHCFN NNNGGQQINN SNNDSSNSWQ LEQMNAAFNL  120
ENQNQDPIFN TAQYPTTTDL LNIFPFPKYP SLLSNSSISF STHNKNSSNN NFLASLGLLG  180
EINPNVGGDG TSASGSVIYD PLLPLNLPPQ PPLLRDLFHS LPNNYTKNGG CSLFGNVDER  240
DNNNNHGNVG LMYQNDNGVF EFTAAGEIDC VGKSRDGKDT KHFATERHRR LLLNDKFQAL  300
RKLIPNPSKD DRASIVGDAI NYINELKRSV AELKLLVEKK RCSRERMKRP KTENENESNS  360
LGNLESGSSL RSSWLQRKSK NTEVDVRIVD DEVTVKLVQQ KRINCLLFVS KVLDELQLDL  420
HHVAGGLIGD YYSFLFNSKI CEGSIVYASA VANKLIEVVD KQYAAIPPSS SY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01685.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831429.10.0PREDICTED: transcription factor bHLH91-like isoform X1
SwissprotQ8GX466e-85BH091_ARATH; Transcription factor bHLH91
TrEMBLA0A022RQJ50.0A0A022RQJ5_ERYGU; Uncharacterized protein
STRINGMigut.N01685.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-68bHLH family protein
Publications ? help Back to Top
  1. Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
    Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
    Differentiation, 2010. 80(1): p. 1-8
    [PMID:20219281]
  2. Cui J, et al.
    Feedback Regulation of DYT1 by Interactions with Downstream bHLH Factors Promotes DYT1 Nuclear Localization and Anther Development.
    Plant Cell, 2016. 28(5): p. 1078-93
    [PMID:27113773]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]