PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01757.1.p
Common NameLOC105952359, MIMGU_mgv1a012916mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB
Protein Properties Length: 237aa    MW: 27217.6 Da    PI: 6.9562
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01757.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.41.4e-12853146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46
                      +g+W +eEd  l++ v+++G+g+W++  r  g ++Rt+k+c++rw +
  Migut.N01757.1.p  8 KGPWKEEEDRVLIEHVRKYGPGHWSS-LRSKGlLRRTGKSCRLRWVN 53
                      79************************.777778************87 PP
2Myb_DNA-binding422.1e-1364103344
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                       ++T+eE+ + +++  q+G++ W++Ia ++  gRt++++k++w
  Migut.N01757.1.p  64 KFTAEEERRVIELQGQFGNK-WARIATYLT-GRTDNDVKNFW 103
                       89******************.********9.*********** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.68359IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.3E-21357IPR009057Homeodomain-like
SuperFamilySSF466892.86E-276103IPR009057Homeodomain-like
SMARTSM007179.7E-11757IPR001005SANT/Myb domain
PfamPF002497.5E-11853IPR001005SANT/Myb domain
CDDcd001674.75E-111055No hitNo description
Gene3DG3DSA:1.10.10.602.1E-1758109IPR009057Homeodomain-like
PROSITE profilePS5129416.23760111IPR017930Myb domain
SMARTSM007177.3E-1161109IPR001005SANT/Myb domain
PfamPF002491.6E-1164103IPR001005SANT/Myb domain
CDDcd001673.17E-964103No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MEEEMIKKGP WKEEEDRVLI EHVRKYGPGH WSSLRSKGLL RRTGKSCRLR WVNKLRPHLK  60
TGEKFTAEEE RRVIELQGQF GNKWARIATY LTGRTDNDVK NFWSSRQKRL TRILHTCSSS  120
SSSTTNQQLE YSPVPHHLPS FPAPNFASPP KQEHNTFQLE YTSQIPSYLN EFERSNGPSP  180
GPTEQPPIMP AFFGQGHNCQ IAPMQEPNGE VDIDFMIDDD FPPIDMFDSF STPDLI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C4e-26610925126MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01757.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831357.11e-178PREDICTED: transcription factor MYB24-like
TrEMBLA0A022RPG01e-177A0A022RPG0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42072342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60460.19e-64MYB family protein