PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01771.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 195aa    MW: 20812.8 Da    PI: 8.6026
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01771.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.85.4e-10155180530
                       HHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   5 hnerErrRRdriNsafeeLrellPka 30 
                       hn+ Er+RRd+iN+++ +L++l+P++
  Migut.N01771.1.p 155 HNQSERKRRDKINQRMKTLQKLVPNS 180
                       9***********************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-9149183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.614150194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-10154180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-7155180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.61E-8155187No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MDAFVPGRNN IPRNDDDEHN PENSAHVLEY VVGSSTHVGS CSGAAAHGGR SALAAACGCK  60
VVGATTAASE SATFGGRDDS FQLTLDTCGG LTSTSMWSPE NTSSGKEYSR TSADDHDYSG  120
CRSRSQSEAD DCGKRKLGHG KSSVTIKKTR AAAIHNQSER KRRDKINQRM KTLQKLVPNS  180
SKVTEILYNN RNFV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163ERKRRD
2159164RKRRDK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01771.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831499.11e-133PREDICTED: transcription factor UNE10-like
TrEMBLA0A022RPH01e-132A0A022RPH0_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.N01771.1.p1e-143(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43672132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.13e-26bHLH family protein