PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01779.1.p
Common NameMIMGU_mgv1a023565mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 227aa    MW: 24876.5 Da    PI: 7.9396
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01779.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00074114136123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       y+C+ Cg+ F++   L  H  +H
  Migut.N01779.1.p 114 YRCETCGRLFRSYQALGGHRASH 136
                       9***********99999998887 PP
2zf-C2H213.20.00027164186123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++Cp C+++Fs+   L  H rtH
  Migut.N01779.1.p 164 HECPFCHRVFSSGQALGGHKRTH 186
                       79*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003550.099114136IPR015880Zinc finger, C2H2-like
PfamPF139121.3E-10114138IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.177114141IPR007087Zinc finger, C2H2
SuperFamilySSF576673.43E-9114186No hitNo description
PROSITE patternPS000280116136IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.601.2E-4161186IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.2E-11163187IPR007087Zinc finger, C2H2
SMARTSM003550.031164186IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.681164186IPR007087Zinc finger, C2H2
PROSITE patternPS000280166186IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MEKHHMMMNF YSPENISPSS ASSSSSSEQD SRRVRKSSVF YSDEREFLTV DNDPPPPSPP  60
PVSSVVSDTT SEEDVANCLM MLSRDKWNNN NNREEYSGGI KVVKKSFKVR GGKYRCETCG  120
RLFRSYQALG GHRASHKKAR AAARGTHAPP RVAAREAVVA EKVHECPFCH RVFSSGQALG  180
GHKRTHYING GKGKPPFSRS GEAFGIDLNL PAPSDGDGDD DDDDEI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01779.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831364.11e-102PREDICTED: zinc finger protein ZAT9-like, partial
TrEMBLA0A022RQQ71e-167A0A022RQQ7_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10952480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-31C2H2-like zinc finger protein