PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N01841.1.p
Common NameMIMGU_mgv1a008358mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 377aa    MW: 43128.4 Da    PI: 5.662
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N01841.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like63.34.6e-20178228455
           G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       ++Wt+eLH +Fv+av qL G+ +  Pk+ilelm+ + Lt+ +v+SHLQk R 
  Migut.N01841.1.p 178 IEWTEELHYKFVDAVIQL-GEGRCYPKEILELMNEPRLTRMQVASHLQKCRK 228
                       68****************.9*****************************995 PP
2Response_reg388.6e-1471091104
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+v+ + + ++   ++l+   y ev+++  +++al +l +++  +Dl+++ ++ p++ G++ll+  ++++  l +i+++  ++ e++++al+
  Migut.N01841.1.p   7 VLLVEHDVKDLDKTINMLNYFSY-EVTHVNLASAALSILSKSKikIDLVMMNMNSPDSCGFQLLQDATKRN--LLVILMSNDDDCETTTRALH 96 
                       78888888888889999******.***************999999********************998877..******************** PP

                       TTESEEEESS--H CS
      Response_reg  92 aGakdflsKpfdp 104
                        Ga   + Kp+ +
  Migut.N01841.1.p  97 QGAFLRIKKPVTM 109
                       **********876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521729.25E-163126IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.1E-184146No hitNo description
SMARTSM004489.9E-45115IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011023.1216120IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.0E-87109IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.82E-88110No hitNo description
SuperFamilySSF466892.87E-14174228IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.6E-20174228IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-18178228IPR006447Myb domain, plants
PfamPF002493.3E-6180226IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MAHKIHVLLV EHDVKDLDKT INMLNYFSYE VTHVNLASAA LSILSKSKIK IDLVMMNMNS  60
PDSCGFQLLQ DATKRNLLVI LMSNDDDCET TTRALHQGAF LRIKKPVTMQ MTGYLWQHVL  120
REKTRRQLRE KTIGFNSQDF RDQEEGNQNN YKNVGGRKKK TNSGSQNDDD MLNKKVWIEW  180
TEELHYKFVD AVIQLGEGRC YPKEILELMN EPRLTRMQVA SHLQKCRKAN WLPPGARKSK  240
STNMESTPPK NKARRSKTER FGSMPFIDND EFNPRSRKYN HGANIDPPSS EVFNMGRFFG  300
AGEPSIAYGS QNAPPSDLTD DTFDVSDTDS MVQILSEFDQ DLEMDHKLNE MTTVTNATSD  360
WSQEEEESVN DEEIEG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N01841.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830620.10.0PREDICTED: two-component response regulator ARR12-like
TrEMBLA0A022RVJ00.0A0A022RVJ0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.22e-27response regulator 1