PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02324.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 181aa    MW: 21404 Da    PI: 3.6456
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02324.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.62.7e-15697177
               NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk................kvkaeekewyfFskrdkkyatgkrknra 77
                      lppG+rF+Ptdeel+v+yLk+kv++++++  + i++vd yk +P++L                   ++ ++++  fF +++++ +  + + r+
  Migut.N02324.1.p  6 LPPGIRFKPTDEELIVFYLKPKVDEQPVPP-SEINTVDFYKNDPQTLADdffpeddvyygqyqdeGFQPQQQQDGFFQPQQQQDEGFQPQPRQ 97
                      79*************************999.66**************7446777777666544432223445556777776666554545555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.97E-16264IPR003441NAC domain
PROSITE profilePS5100512.5036164IPR003441NAC domain
PfamPF023657.0E-5788IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    Send to blast
MEFPELPPGI RFKPTDEELI VFYLKPKVDE QPVPPSEINT VDFYKNDPQT LADDFFPEDD  60
VYYGQYQDEG FQPQQQQDGF FQPQQQQDEG FQPQPRQQDE GFQPQPRQQD EGFQPQPRQQ  120
DEGFQQQPRQ QDEGFQPQPR QQDEDEGFQP RQQQDGLFCF FQPQQDEESE YIASLLQNFV  180
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02324.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012844652.11e-115PREDICTED: mediator of RNA polymerase II transcription subunit 15-like isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-13NAC domain containing protein 25