PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02368.1.p
Common NameMIMGU_mgv1a003184mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HB-other
Protein Properties Length: 500aa    MW: 56317.3 Da    PI: 8.4061
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02368.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.7e-182176257
                      T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                      +kR   t+eq+e+Le+++++++yp ++++ ++A+++gLte+qV+ WF+ rR k+kk
  Migut.N02368.1.p 21 KKRIVKTREQVEALEKFYNEHKYPAESMKIQMAESIGLTEKQVSGWFCHRRLKDKK 76
                      89****************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-20576IPR009057Homeodomain-like
PROSITE profilePS5007116.4711777IPR001356Homeobox domain
SMARTSM003891.7E-181981IPR001356Homeobox domain
SuperFamilySSF466892.47E-171985IPR009057Homeodomain-like
CDDcd000861.26E-152176No hitNo description
PfamPF000466.3E-162176IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MAEDSCEMHS EDDKALLEKN KKRIVKTREQ VEALEKFYNE HKYPAESMKI QMAESIGLTE  60
KQVSGWFCHR RLKDKKIIKN GENLTTGGRS SGVVQDRTSG HRQDSCGSTK QGEDNRNFET  120
REVESGRHVP KEYSAVDPTY ERGSHFGGTH NNNRTEDASS GSSSSLRNMS GHQNGSPFFD  180
ATAAISRYPV PKFTQPEVKS VPARRGPSGY LKLKGQVENA SITAVKRQLG KHYREDGPPL  240
GVDFDPLPPG AFESSVQDAT EETYDSGEDA LPASPDVSKI RQSSKFGKGC EYKRMASNNS  300
EIDGSSFKAR RKCDIPNGYI PEKFRVKNSV SNGGTYYPSR NSSVELPENI DRGIPTNPQP  360
YRGKVREERA ESWSRKYNDV STKIPVGENS ENEFFNMRMK ANQYHNPEDK VTLSRQIIKD  420
GKMYHDRRMV NENRVNIPSK NDFIGQKRMR EEFPQQQYLK RSPIVDNLPP TYQVVRSAAE  480
MPSSFSEDEE SAETSSSMD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02368.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838435.10.0PREDICTED: homeotic protein proboscipedia
TrEMBLA0A022RAL20.0A0A022RAL2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34362242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.11e-63HB-other family protein