PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02448.1.p
Common NameMIMGU_mgv1a024694mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family B3
Protein Properties Length: 182aa    MW: 20854.2 Da    PI: 5.2964
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02448.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.41.7e-1071180297
                       EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS...-EEEEEE..EEETTEEEE-TTHH.HHHHHHT--TT-E CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesg...rsWevkliyrkksgryvltkGWk.eFvkangLkegDf 79 
                        k lt+sdv+ s+rl lp+k +++h            +++e + ++++ d +        +kl  + +s++yvl+k+W+ +Fv+  gL e+  
  Migut.N02448.1.p  71 TKSLTKSDVNGSSRLLLPRKLVQDHilvhldnvelaAINEEDGLEVSVLDVDTdthHILAFKL--WSSSKSYVLAKNWSsDFVRRRGLSENRE 161
                       5899*********************99999999999888888889999997776667778888..*************736********9998 PP

                       EEEEE-SS.SEE..EEEEE CS
                B3  80 vvFkldgr.sefelvvkvf 97 
                       + ++ d+r  +++l +++f
  Migut.N02448.1.p 162 IGIRWDRRpGSRSLEFTLF 180
                       8888888877777777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.92E-1265169IPR015300DNA-binding pseudobarrel domain
CDDcd100178.23E-1268181No hitNo description
Gene3DG3DSA:2.40.330.102.1E-1270171IPR015300DNA-binding pseudobarrel domain
PfamPF023621.5E-771180IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MTRLTLGWWG PHTPTTIIES DDDQVVLEPP PDDNNNNNNN NNNNNNPFLE LRIGPPIQRR  60
RVFPDGYWEI TKSLTKSDVN GSSRLLLPRK LVQDHILVHL DNVELAAINE EDGLEVSVLD  120
VDTDTHHILA FKLWSSSKSY VLAKNWSSDF VRRRGLSENR EIGIRWDRRP GSRSLEFTLF  180
D*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02448.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838154.12e-71PREDICTED: B3 domain-containing protein At2g33720-like
TrEMBLA0A022RAT21e-127A0A022RAT2_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.12e-18B3 family protein