PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02933.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 522aa    MW: 58185.7 Da    PI: 4.4631
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02933.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.41.6e-5031292128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       ppGfrFhPtdeelv +yLk+k+ +k+++l +vi e+d+yk++P+dLp + k+k+++++w+fFs++d+ky++g r+nr t +gyWkatgkd+ +
  Migut.N02933.1.p   3 PPGFRFHPTDEELVLYYLKRKICRKRHRL-DVIGETDVYKWDPEDLPeMsKLKSGDRQWFFFSPKDRKYPNGARSNRGTGNGYWKATGKDRII 94 
                       9*************************999.9***************952588999************************************** PP

               NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        + ++++vg+kktLv+++grap+g +tdWvmhey++
  Migut.N02933.1.p  95 SC-GSRAVGIKKTLVYHRGRAPSGIRTDWVMHEYTM 129
                       99.99*****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.06E-582153IPR003441NAC domain
PROSITE profilePS5100556.3442153IPR003441NAC domain
PfamPF023657.8E-263128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    Send to blast
MFPPGFRFHP TDEELVLYYL KRKICRKRHR LDVIGETDVY KWDPEDLPEM SKLKSGDRQW  60
FFFSPKDRKY PNGARSNRGT GNGYWKATGK DRIISCGSRA VGIKKTLVYH RGRAPSGIRT  120
DWVMHEYTME EKELKRCETE ATEYYVLCKV YKKSGPGPKN GEQYGAPFRE EEWADDEIEQ  180
ENSVKRADEI TRVEDTEEVD RVHLSTLNVL EGIMSRVVDD PTPVDITQLG TTQLQFIEAC  240
EVASTQIVNG RDLCAAQEGE LEDFLEMDDL ISTEPTTQNL CEPVNNLDEL QFDGFDGLDG  300
FDMYRDASMF LGEVGSVQSG QISGLYMDAF DDGFISPISS MFENNVMGDY QPHQQSDNAN  360
VISYTQKPDE QNCSAATASV TAAEADQGWI PSSTSGVLHR NQNNGFVNDS AGANEIGGGK  420
EDDGTESWFS SALWSFVESI PTTPASASEI ASVNRAFERM SSFNRIRTNA TNTNVAAGNY  480
TSATSVKKSR CGFLFFSLLG VMCAVLWVLI GASVRVMSLY L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-49215317165NO APICAL MERISTEM PROTEIN
1ut4_B3e-49215317165NO APICAL MERISTEM PROTEIN
1ut7_A3e-49215317165NO APICAL MERISTEM PROTEIN
1ut7_B3e-49215317165NO APICAL MERISTEM PROTEIN
3swm_A3e-49215320168NAC domain-containing protein 19
3swm_B3e-49215320168NAC domain-containing protein 19
3swm_C3e-49215320168NAC domain-containing protein 19
3swm_D3e-49215320168NAC domain-containing protein 19
3swp_A3e-49215320168NAC domain-containing protein 19
3swp_B3e-49215320168NAC domain-containing protein 19
3swp_C3e-49215320168NAC domain-containing protein 19
3swp_D3e-49215320168NAC domain-containing protein 19
3ulx_A3e-49215415169Stress-induced transcription factor NAC1
4dul_A3e-49215317165NAC domain-containing protein 19
4dul_B3e-49215317165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02933.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838927.10.0PREDICTED: NAC domain-containing protein 17-like
TrEMBLA0A022R8440.0A0A022R844_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32122451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-114NAC domain containing protein 17