PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02963.1.p
Common NameMIMGU_mgv1a022035mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Nin-like
Protein Properties Length: 887aa    MW: 98529.7 Da    PI: 6.719
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02963.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK91.65.8e-29554605152
            RWP-RK   1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       aek+i+l++l+++F++++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rkik++
  Migut.N02963.1.p 554 AEKTITLQVLRQHFAGSLKDAAKSLGVCPTTLKRICRQHGIQRWPSRKIKKV 605
                       589***********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.450.405.4E-5182263IPR029016GAF domain-like
SuperFamilySSF557813.92E-5188265IPR029016GAF domain-like
PROSITE profilePS5151917.405544625IPR003035RWP-RK domain
PfamPF020422.6E-26557605IPR003035RWP-RK domain
SuperFamilySSF542772.16E-22781865No hitNo description
SMARTSM006667.3E-25783870IPR000270PB1 domain
PROSITE profilePS5174524.719783869IPR000270PB1 domain
CDDcd064071.22E-40785865No hitNo description
Gene3DG3DSA:3.10.20.2408.6E-23785864No hitNo description
PfamPF005641.7E-19785864IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 887 aa     Download sequence    Send to blast
MEQGVLPLST MMGPTSDPFM DLDYMDELLL EGCWLEANGS EFSNFDSSAP FSPFQPSFPW  60
PALEPANHNT ESSASPSKYG QHEGQKSYFP DNLSISQSRF SSENYLLESC ELNKRWWIGP  120
RPSLSVIDRL IQALAYIKDC SRDKNVLIQV WVPVNGGGKR VLTTNNQPFS LDLNCPSLAH  180
YREISVNYQF PAEEDSKEVV GLPGRVFRNK VPEWTPDVRF FTRDEYPRVD HALQYDVRGT  240
LAVPVLEQGS GNCLGVIEVV LTTQKIQYRP ELESVCKALE AVDLRSAEVA CTQAVKTPDF  300
SYQAALPEIL DVLRSACETH GLPLAQTWVP CSLQGKGGYW HSDDNLKNCI SPVDSACHIG  360
NPHIQGFHEA CSEYHLLRGQ GIVGRAFGTN QPCFLPDVSA CSKTEYPLSH HARMFGLKAA  420
VAIRLRSICT GSTDFVLEFF LPINCTEPEE QKKMLTSLSA IIQNVCRTLR VVTDKELQEE  480
SRLPDQVPNI ESKEFLGPYS SQVNCQKGKS REKLVESSKA SLKEGVALTA NASTSGDCSS  540
LYTSKTGEKK RIKAEKTITL QVLRQHFAGS LKDAAKSLGV CPTTLKRICR QHGIQRWPSR  600
KIKKVGHSLQ KIQRVIDSVQ GTSGVLQIES FYSSFPELAS PNASTRTTQF SHSKSADNLN  660
PLNGPHEGTT ISRPPGPNPA TSPSPPTSSC SQSSNSSQCC SSGAQPNHSS SLSPQDPTAK  720
EEEEPVKENF KRARSDADFN NLTGDGPPKV LPRSHSHVSF CWPDKTEVAK EEDNGEKTRE  780
RDGPRIKVTY GEDTIRFRMQ NNWRYRDLLR EISRRFGVDN NNNVGGFHLK YLDDDGEWVL  840
LTCDADLEEC IDVCRSSRSQ TIRLSFLCDS HSQFGRSFGF RGPFSL*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02963.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838969.10.0PREDICTED: protein NLP5-like
SwissprotQ9SFW80.0NLP5_ARATH; Protein NLP5
TrEMBLA0A022R8660.0A0A022R866_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA15982467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.10.0Nin-like family protein