PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N03067.1.p
Common NameMIMGU_mgv1a014878mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 176aa    MW: 19500.2 Da    PI: 7.4126
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N03067.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.2e-0564991555
                      HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ++ ++++ L++l+ +      +K + a++L +++eYI+ Lq
  Migut.N03067.1.p 64 KVSERISALQQLVSPY-----GKTDTASVLLETMEYIRFLQ 99
                      78899********999.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.024998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-455104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.32E-1157112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.52E-660103No hitNo description
Gene3DG3DSA:4.10.280.108.0E-963106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009739Biological Processresponse to gibberellin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MHAVFCQPRE SNFLGTDSDL LMERREMMQH KRGPISLEQN SFTDLMPKRL KTDVPLSTKE  60
KKEKVSERIS ALQQLVSPYG KTDTASVLLE TMEYIRFLQE QVKVLSAPYL YSTPTQSQEE  120
EQSSLRGKGL CLVPVSLTVG VGSSNGADIW APVKTGPQYS RRTVSDEAAS AITQS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N03067.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839065.11e-105PREDICTED: transcription factor bHLH113-like
RefseqXP_012839066.11e-105PREDICTED: transcription factor bHLH113-like
SwissprotQ7XJU29e-53BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A022RAC51e-126A0A022RAC5_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10428811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.54e-55bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]