PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.N03106.1.p

Common Name

LOC105959531, MIMGU_mgv1a000887mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Nin-like

Protein Properties

Length: 951aa MW: 105071 Da PI: 5.5862

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.N03106.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.8e-29	594	645	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ Migut.N03106.1.p 594 AEKHVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 645 5899**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.268	577	665	IPR003035	RWP-RK domain
Pfam	PF02042	3.9E-26	598	645	IPR003035	RWP-RK domain
SuperFamily	SSF54277	7.85E-23	846	934	No hit	No description
Gene3D	G3DSA:3.10.20.240	3.1E-24	847	929	No hit	No description
PROSITE profile	PS51745	20.08	850	932	IPR000270	PB1 domain
SMART	SM00666	9.1E-22	850	932	IPR000270	PB1 domain
Pfam	PF00564	1.1E-16	852	931	IPR000270	PB1 domain
CDD	cd06407	1.00E-31	853	931	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 951 aa Download sequence Send to blast
MEYYFPSKEK DNNDSALLRG RMEGMTTGST DNGTRGLYTE DSFNVAELMN FDTYAGWCNS 60 PTNLSDQMFA YSSPLTAPST NYSSFDGFNF THQYNSGMPV VDDDIMGSPF GEDKVIFRQI 120 DSQMTSATNC ADDGYLLVEA KDESSSKHDL IESVVNNVIP RPPVLTLAEK MLKALNLFKE 180 WSGGGILAQL WVPMKNGDQY ILSTCEQPYL LDQTLSGYRE VSRSFTFATE SKPGSFLGLP 240 GRVFASKIPE WTSNVMYYNK AEYLRVQYAV DHEIRGSIAL PIFDDDSREK SCCAVLELVT 300 MKEKPNFDLE MENVCRALQV VNLTSTVPQR HCPKSLSKNQ KAALAEITDV LRAVCYAHRL 360 PLALTWIPCS YLKDNGGCNR SANKKCVLCI EDSACYVNDK DIKGFVHACA EHYLEEGQGI 420 VGKALQSNHP FFYPDVKEYH ISEYPLVHHA RKFGLNAAVA IKLRSIYTGD DDYILELFLP 480 VNMKGSKEQQ LLLNNLSSTM QRICKSLRTV SDADLHGIDN SRDKLYDVET RKSPAISLSR 540 RSSEQSLISG NICTIDPMTQ NISESVPIVI EADGTRGQTM TGSRKQTEKK RSTAEKHVSL 600 SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR KIQIVLDSVQ 660 GVEGALKFDP TTGGLVASGS IIQELDSGKR FAFSNKDQSI ENPNNPAVIH NSKSTSYMDF 720 ETTTVKMEEE CLLDGNQVVG ECQNNVIWPT SPNFLAVPSK SHFIHQNSSS IIEAGNELDV 780 KDDAGMDRGD GIVEHTQPTS SGMTDSSNGS GSGSGSGSGS LMNDSSSSSR SFRRGHIRKN 840 ETSCGDSGSK IVVKATYNED TVRFKFEPSA GYFQLYEEVA KRFKLQVGQF QLKYLDDEEE 900 WVMLVSDSDL QECLDILDFV GTRNVKFLVR DVASGVGSSG GSNGFLGEGS *

Sequence ? help Back to Top

Protein Sequence Length: 951 aa Download sequence Send to blast

MEYYFPSKEK DNNDSALLRG RMEGMTTGST DNGTRGLYTE DSFNVAELMN FDTYAGWCNS  60
PTNLSDQMFA YSSPLTAPST NYSSFDGFNF THQYNSGMPV VDDDIMGSPF GEDKVIFRQI  120
DSQMTSATNC ADDGYLLVEA KDESSSKHDL IESVVNNVIP RPPVLTLAEK MLKALNLFKE  180
WSGGGILAQL WVPMKNGDQY ILSTCEQPYL LDQTLSGYRE VSRSFTFATE SKPGSFLGLP  240
GRVFASKIPE WTSNVMYYNK AEYLRVQYAV DHEIRGSIAL PIFDDDSREK SCCAVLELVT  300
MKEKPNFDLE MENVCRALQV VNLTSTVPQR HCPKSLSKNQ KAALAEITDV LRAVCYAHRL  360
PLALTWIPCS YLKDNGGCNR SANKKCVLCI EDSACYVNDK DIKGFVHACA EHYLEEGQGI  420
VGKALQSNHP FFYPDVKEYH ISEYPLVHHA RKFGLNAAVA IKLRSIYTGD DDYILELFLP  480
VNMKGSKEQQ LLLNNLSSTM QRICKSLRTV SDADLHGIDN SRDKLYDVET RKSPAISLSR  540
RSSEQSLISG NICTIDPMTQ NISESVPIVI EADGTRGQTM TGSRKQTEKK RSTAEKHVSL  600
SVLQQYFSGS LKDAAKSIGV CPTTLKRICR QHGISRWPSR KINKVNRSLR KIQIVLDSVQ  660
GVEGALKFDP TTGGLVASGS IIQELDSGKR FAFSNKDQSI ENPNNPAVIH NSKSTSYMDF  720
ETTTVKMEEE CLLDGNQVVG ECQNNVIWPT SPNFLAVPSK SHFIHQNSSS IIEAGNELDV  780
KDDAGMDRGD GIVEHTQPTS SGMTDSSNGS GSGSGSGSGS LMNDSSSSSR SFRRGHIRKN  840
ETSCGDSGSK IVVKATYNED TVRFKFEPSA GYFQLYEEVA KRFKLQVGQF QLKYLDDEEE  900
WVMLVSDSDL QECLDILDFV GTRNVKFLVR DVASGVGSSG GSNGFLGEGS *

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.N03106.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012839102.1	0.0	PREDICTED: protein NLP9
Swissprot	O22864	0.0	NLP8_ARATH; Protein NLP8
TrEMBL	A0A022R8P4	0.0	A0A022R8P4_ERYGU; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3981	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.2	0.0	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Migut.N03106.1.p
Entrez Gene	105959531

Publications ? help Back to Top
Yan D, et al. NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis. Nat Commun, 2016. 7: p. 13179 [PMID:27731416]