PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N03227.1.p
Common NameLOC105959637, MIMGU_mgv1a007325mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 412aa    MW: 47722.6 Da    PI: 7.0753
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N03227.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix77.71.8e-24117213186
          trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 
                       +Wt+ +v++Li+a++++ e+  + +          +kk++W++vsk+m+erg  +sp+qC++k+++lnkryk+++e+ +++ ++e++++ +++
  Migut.N03227.1.p 117 KWTDAMVRLLITAVSYISEEAAEYSgtskrkcanlQKKGKWKSVSKVMAERGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVENPSLL 209
                       7**************99999997544456777888**********************************************669****99999 PP

          trihelix  83 dqle 86 
                       + ++
  Migut.N03227.1.p 210 EVMD 213
                       9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.9E-22115239No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MEGDLSSRNL MQSNTSYIGF NSQVPMRVHH HQQQQQQHNN PHPKQGSSSS SMIYPTIHEK  60
FPLPIIGTIQ EDQPVSLLDY NKPNMPKSPS EDEEPSFSEE PTKGKKSSSS SPWQRVKWTD  120
AMVRLLITAV SYISEEAAEY SGTSKRKCAN LQKKGKWKSV SKVMAERGHF VSPQQCEDKF  180
NDLNKRYKRL NEILGRGTSC EVVENPSLLE VMDHISTKAK DEVRKILSSK HLHYEEMCSY  240
HNGNRLHLPP DPDLQHSLRL ALRNDEAEVK RHHSNEDNEE VDQEDNELVH DDRAYVVQGN  300
SAKKVKPCRG HEEFHHRGSS KSDKVVAFEG GTTKMNTVTA NSWNLQIEEQ RVHIEEQMLE  360
LEKERFKWQK FCQKKDRELE IMRIEIERMK LENERMALDL RRREMGIIDN N*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N03227.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012839235.10.0PREDICTED: uncharacterized protein LOC105959637
RefseqXP_012839236.10.0PREDICTED: uncharacterized protein LOC105959637
TrEMBLA0A022RD740.0A0A022RD74_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA76001830
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.15e-90sequence-specific DNA binding transcription factors