PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.O00369.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 210aa    MW: 23242.4 Da    PI: 9.1308
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.O00369.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-17117167255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +gr++AeIrdp+      r++lg++ t  +Aa+a++ a+ +++g
  Migut.O00369.1.p 117 RYRGVRRRP-WGRYAAEIRDPTRK--GSRVWLGTYETDVDAARAYDCAAFEMRG 167
                       7********.**********8542..4**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.25E-22117176IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.5E-31117176IPR001471AP2/ERF domain
PROSITE profilePS5103224.342117175IPR001471AP2/ERF domain
PfamPF008475.3E-13117167IPR001471AP2/ERF domain
SMARTSM003801.9E-33117181IPR001471AP2/ERF domain
PRINTSPR003671.2E-12118129IPR001471AP2/ERF domain
CDDcd000181.04E-22125177No hitNo description
PRINTSPR003671.2E-12157177IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MMTTISHNNI EALKLELLTR YLLEDLTSPD TKPIWSPDSP SSGSDFCSEP SQPDSPISRY  60
FSSSPDLFEF ETKPEIINLS PHPASMKPVK PELPVCSDDL MITGSGISTS SVVARRRYRG  120
VRRRPWGRYA AEIRDPTRKG SRVWLGTYET DVDAARAYDC AAFEMRGTKA ILNFPADAGK  180
YAPPVAVAGR KMGRGRSYKV VQPSCIRNH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-25116175463ATERF1
3gcc_A2e-25116175463ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.O00369.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847846.11e-154PREDICTED: ethylene-responsive transcription factor ERF107-like
TrEMBLA0A022QLW71e-128A0A022QLW7_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.11e-28ERF family protein