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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
NNU_000301-RA |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
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| Family |
BBR-BPC |
| Protein Properties |
Length: 277aa MW: 30520 Da PI: 10.3132 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_000301-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 337.1 | 4.7e-103 | 1 | 277 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnklla 83
mdddg + rn+gyyep+ +lglqlms++aerd+k+ r++ + + + ++a+++rd m++ +d++++ +++l+
NNU_000301-RA 1 MDDDGLNIRNWGYYEPR----GHLGLQLMSTVAERDTKTlisgRDSTV-MVGANGAFHPRDcgvseapvhMEY-VKDSWMNR---------ERFLH 81
9****988********9....89***************99*9999988.************999999999999.89999999.........7899* PP
GAGA_bind 84 lllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvk 179
+l+ + + vls+++++++lq+ ++++ + e + iee k+ kkrq+++ +k++kakk+k+ +++k++++
NNU_000301-RA 82 MLPGNP--------NFAVLSEASTAHHLQM-----IQPPDSS--KDE--RVARIEE--AGGKKDGPLKKRQSGRAQKSPKAKKPKR-VPAPKDESN 157
*99554........478999******9*99.....3333222..333..3445555..456677788889***************9.557767777 PP
GAGA_bind 180 kesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaae 275
++ +r+ka kk++++v+ngv++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtt+iS+yPLP+stkrrgaRiagrKmSqgafkk+LekLaae
NNU_000301-RA 158 SSV--SRAKAGKKNMGVVINGVNMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTSISMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAE 251
777..79***************************************************************************************** PP
GAGA_bind 276 GydlsnpvDLkdhWAkHGtnkfvtir 301
Gy+lsnp+DL+++WAkHGtnkfvtir
NNU_000301-RA 252 GYNLSNPIDLRTYWAKHGTNKFVTIR 277
*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 277 aa
Download sequence Send
to blast |
MDDDGLNIRN WGYYEPRGHL GLQLMSTVAE RDTKTLISGR DSTVMVGANG AFHPRDCGVS 60
EAPVHMEYVK DSWMNRERFL HMLPGNPNFA VLSEASTAHH LQMIQPPDSS KDERVARIEE 120
AGGKKDGPLK KRQSGRAQKS PKAKKPKRVP APKDESNSSV SRAKAGKKNM GVVINGVNMD 180
ISGIPIPVCS CTGTPQQCYR WGCGGWQSAC CTTSISMYPL PMSTKRRGAR IAGRKMSQGA 240
FKKVLEKLAA EGYNLSNPID LRTYWAKHGT NKFVTIR
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
