PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_002279-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 133aa MW: 15825.8 Da PI: 11.9976

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_002279-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.5	2.5e-12	36	82	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r+rr+ +NRe+ArrsR RK++ +e L++ v L eN+++ ++l NNU_002279-RA 36 RRQRRMKSNRESARRSRMRKQKHLEDLRNQVNRLRIENRDMTNRLGI 82 79***************************************988865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.9E-11	32	96	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.588	34	80	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.9E-9	36	109	No hit	No description
SuperFamily	SSF57959	1.37E-11	36	87	No hit	No description
Pfam	PF00170	5.6E-11	36	89	IPR004827	Basic-leucine zipper domain
CDD	cd14702	3.73E-14	37	87	No hit	No description
PROSITE pattern	PS00036	0	39	54	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence Send to blast
MTPSPTQTQV NNNNNPTNSN SGSDEPNPSV LAVDERRQRR MKSNRESARR SRMRKQKHLE 60 DLRNQVNRLR IENRDMTNRL GIVVHNCYLI RKDNDRLRLE SVFLRQRLSD ISRILRYRHF 120 QQFSSQQIPS LIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	48	55	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021274424.1	3e-45	basic leucine zipper 4-like
Refseq	XP_022752064.1	2e-45	basic leucine zipper 4-like
TrEMBL	A0A061DIP8	6e-43	A0A061DIP8_THECC; Basic leucine-zipper 5, putative
STRING	XP_010273467.1	4e-90	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.2	1e-23	basic leucine-zipper 6