PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_002737-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 170aa MW: 19856.4 Da PI: 10.4294

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_002737-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.3	2.5e-11	57	109	4	56
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+++NRe+ArrsR RK++ +e L++ L eN + +l ++ ++ NNU_002737-RA 57 ERKRRRMISNRESARRSRMRKQKHLEDLRDQLNRLRVENGEITTRLGIITRNC 109 5678999********************************99988887776666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-9	50	108	No hit	No description
SMART	SM00338	1.8E-14	54	118	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.657	56	119	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.13E-11	58	112	No hit	No description
Pfam	PF00170	6.2E-9	58	110	IPR004827	Basic-leucine zipper domain
CDD	cd14702	3.80E-18	59	110	No hit	No description
PROSITE pattern	PS00036	0	61	76	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence Send to blast
MLPDFDLPPC PVFEGGFTPW ESQEFVSLFQ TPLKQENSAN SNSGSDEPNR AVSAEDERKR 60 RRMISNRESA RRSRMRKQKH LEDLRDQLNR LRVENGEITT RLGIITRNCH LIRRDNDRLK 120 SESVLLRQRL SDISRILLYR QLQQFSSPSL CPSTNRPLNL NYNNGLHLIP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	61	RKRRR
2	57	78	RKRRRMISNRESARRSRMRKQK
3	70	77	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021274424.1	4e-53	basic leucine zipper 4-like
TrEMBL	A0A200PSH2	4e-55	A0A200PSH2_9MAGN; Basic-leucine zipper domain
STRING	XP_010248350.1	1e-120	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	1e-27	basic leucine-zipper 5