PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_003652-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

CPP

Protein Properties

Length: 947aa MW: 104532 Da PI: 7.4394

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_003652-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.5	3.5e-15	606	644	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCk+skClk+YCeCfaag++C+e C C +C+Nk e NNU_003652-RA 606 CKRCNCKRSKCLKLYCECFAAGVYCAEPCACLECFNKPE 644 89**********************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	3.3E-16	604	645	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	22.068	605	708	IPR005172	CRC domain
Pfam	PF03638	2.5E-11	607	642	IPR005172	CRC domain
SMART	SM01114	0.34	692	725	IPR033467	Tesmin/TSO1-like CXC domain

Sequence ? help Back to Top
Protein Sequence Length: 947 aa Download sequence Send to blast
MDSPENNRIV TTSSSSPPVQ DSPFFNYLSN LSPIKTVKTV RVAQGFSEIN FSAPAPVFTS 60 PRINTKREAS FLKRPQYFHS SNTEFSQNDD RVKMLIASSD VSGPSITEPM VDISNNIQKK 120 CDSNDSPQVH SCSPSGYIDE YLADHVDADS PNSADSHLKQ SNDTPQQIQN QCTSSEETVV 180 KSDIEIDAKK DTDSRALACE TSLEKSGRNY LGRSLLPIKL VETKDKQKDA ERLSNESPCL 240 LSEQVNDFVE SDLSPELASA TENDENLVDQ VSTESTFIKS KKTEHETVGL ESLDNERSTL 300 SISVCHNKSQ KVKLQNTEVR KQDKWDCTTE VLNESLHIAQ ADEDHDKNSG VISRRSFEKK 360 MPQDLEAASQ NRGTRRRCLQ FEAAEAQRNI LGTSHSCNSE NSMDNLQLPA ILEILDSSHL 420 KSSATSSMRQ PVKLSQPITS RLSRCAVENT EAHVDNVDRF VQKSGNALLS VPRPSGIGLH 480 LNSIVNAAAM GSSATASMKF TEREHPRILE AKSEAVIDHH LPEDSKMISL ATNTVENFSA 540 NTSDDQQESL AIVVVPSQKL KVAEHHMTPD AKRSASENAD RFEEINQLSP KKKRKRASHT 600 IEKEGCKRCN CKRSKCLKLY CECFAAGVYC AEPCACLECF NKPEYEDTVL GTRQQIESRN 660 PLAFAPKIVR HVTESPANTG EDGNRMTPSS ARHKRGCNCK KSMCLKKFDS LALSNLMYCY 720 ACFELLLIGR ILLLDNKRLV LDALMDADVR GAKIHGKDAS KSRLPAIRCL PSPESDSIVL 780 SSYGKSPVSP LKSNSNERRQ KMSGDNFSTS SVSSNSRDCT KVSRTQLCHG SGRLSAIGSL 840 RWRSSPITPI SRLGGCELPQ ESDSDNRLFD ILEDDTPDIL KDTRTPIKAV KASSPNQKRV 900 SPPHSRLHEL RSSSSPGLKS GRKFILQAVP SFPPLTPYSE PKCSGTG

Sequence ? help Back to Top

Protein Sequence Length: 947 aa Download sequence Send to blast

MDSPENNRIV TTSSSSPPVQ DSPFFNYLSN LSPIKTVKTV RVAQGFSEIN FSAPAPVFTS  60
PRINTKREAS FLKRPQYFHS SNTEFSQNDD RVKMLIASSD VSGPSITEPM VDISNNIQKK  120
CDSNDSPQVH SCSPSGYIDE YLADHVDADS PNSADSHLKQ SNDTPQQIQN QCTSSEETVV  180
KSDIEIDAKK DTDSRALACE TSLEKSGRNY LGRSLLPIKL VETKDKQKDA ERLSNESPCL  240
LSEQVNDFVE SDLSPELASA TENDENLVDQ VSTESTFIKS KKTEHETVGL ESLDNERSTL  300
SISVCHNKSQ KVKLQNTEVR KQDKWDCTTE VLNESLHIAQ ADEDHDKNSG VISRRSFEKK  360
MPQDLEAASQ NRGTRRRCLQ FEAAEAQRNI LGTSHSCNSE NSMDNLQLPA ILEILDSSHL  420
KSSATSSMRQ PVKLSQPITS RLSRCAVENT EAHVDNVDRF VQKSGNALLS VPRPSGIGLH  480
LNSIVNAAAM GSSATASMKF TEREHPRILE AKSEAVIDHH LPEDSKMISL ATNTVENFSA  540
NTSDDQQESL AIVVVPSQKL KVAEHHMTPD AKRSASENAD RFEEINQLSP KKKRKRASHT  600
IEKEGCKRCN CKRSKCLKLY CECFAAGVYC AEPCACLECF NKPEYEDTVL GTRQQIESRN  660
PLAFAPKIVR HVTESPANTG EDGNRMTPSS ARHKRGCNCK KSMCLKKFDS LALSNLMYCY  720
ACFELLLIGR ILLLDNKRLV LDALMDADVR GAKIHGKDAS KSRLPAIRCL PSPESDSIVL  780
SSYGKSPVSP LKSNSNERRQ KMSGDNFSTS SVSSNSRDCT KVSRTQLCHG SGRLSAIGSL  840
RWRSSPITPI SRLGGCELPQ ESDSDNRLFD ILEDDTPDIL KDTRTPIKAV KASSPNQKRV  900
SPPHSRLHEL RSSSSPGLKS GRKFILQAVP SFPPLTPYSE PKCSGTG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010250000.1	0.0	PREDICTED: uncharacterized protein LOC104592360 isoform X2
TrEMBL	A0A1U7ZPH6	0.0	A0A1U7ZPH6_NELNU; uncharacterized protein LOC104592360 isoform X2
STRING	XP_010249998.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-50	TESMIN/TSO1-like CXC 2