 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
NNU_003813-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
|
| Family |
GRAS |
| Protein Properties |
Length: 168aa MW: 19261 Da PI: 5.3086 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| NNU_003813-RA | genome | CAS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 142.4 | 4.5e-44 | 1 | 168 | 207 | 374 |
GRAS 207 vlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvac.e 301
+lql++llde++ + + L+lvks Pkvv++ e ea +n+ +Fl+rf al+yysa+f+sle +l r+s e +E llgr+i vv e
NNU_003813-RA 1 MLQLYNLLDETTVAVE---RALRLVKSPTPKVVTLGEYEAGLNQVDFLNRFKTALRYYSAIFESLEPSLTRDSTEHLRIESLLLGRRIYGVVGPeE 93
5789999988877777...9************************************************************************8616 PP
GRAS 302 gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
g +r+er+e++e+Wr e +GF++v+ls++a++qak ll +++ s y++ e+ ++ l W++ +L++vS+Wr
NNU_003813-RA 94 GPMRQERMEEKEQWRVLTEGCGFESVALSHYAMNQAKILLWNYNySSSYSLVESPLGFLsLAWNSVSLLTVSSWR 168
788*****************************************9999*99988555555**************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 168 aa
Download sequence Send
to blast |
MLQLYNLLDE TTVAVERALR LVKSPTPKVV TLGEYEAGLN QVDFLNRFKT ALRYYSAIFE 60
SLEPSLTRDS TEHLRIESLL LGRRIYGVVG PEEGPMRQER MEEKEQWRVL TEGCGFESVA 120
LSHYAMNQAK ILLWNYNYSS SYSLVESPLG FLSLAWNSVS LLTVSSWR
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development (By similarity). Involved in environmental abiotic stress resistance. May increase the expression of stress-responsive genes (PubMed:20616154). Binds DNA in vitro (By similarity). {ECO:0000250|UniProtKB:Q53K16, ECO:0000250|UniProtKB:Q9SCR0, ECO:0000269|PubMed:20616154}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated by drought and high salt stresses, and down-regulated by gibberellic acid (GA) treatment, but not by plant hormone abscisic acid (ABA) application in leaves. Under the salt treatment, expression is induced quickly, and it peaks at 3 hours. Under the drought treatment, the expression is not induced immediately, but reaches its maximum at 3 hours. Under the GA treatment, the expression becomes weaker within 5 hours. {ECO:0000269|PubMed:20616154}. |
