PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_004382-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

Dof

Protein Properties

Length: 319aa MW: 34756.8 Da PI: 7.0184

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_004382-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.4	4.1e-40	52	111	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknk++ NNU_004382-RA 52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNIPVGGGCRKNKRV 111 7899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51020	8.979	1	62	IPR009465	Spondin, N-terminal
ProDom	PD007478	3.0E-30	50	110	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.9E-33	53	110	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.292	56	110	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	58	94	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MGLTSLQVCM DTSDWLQGAT HEENGMDASS PSGDSIITCS RPLLERRLRP QHDQALKCPR 60 CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGSLRNIP VGGGCRKNKR VAVKKSDTDQ 120 SLLNKHPSSS SHDVTDLQLS FPEVQLSHLT NQLFGHPAAS LGNPNFMNKY NNAVLDNPRS 180 VDFMENSKLF DAILGNSRNH DFMGNSELGL VGGLGVGDVG HGFTPSNNLH AVSSPFGFSL 240 EGSSGGSFMD TCQRLMLPLG GSEDPNAIEA KPNNKLLTLE WQDQGCSEVG KDSFGYINSL 300 GSWTGVMNGY GSSATNPLV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010251236.1	0.0	PREDICTED: dof zinc finger protein DOF5.6-like
TrEMBL	A0A1U7ZSL2	0.0	A0A1U7ZSL2_NELNU; dof zinc finger protein DOF5.6-like
STRING	XP_010251236.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-51	Dof family protein