PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_004690-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 91aa    MW: 10565 Da    PI: 4.1555
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_004690-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.43e-151461149
            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                   l+pGf+F Ptdeel+v+yL +k+++ +l++ ++i+e++iy+++P++L  
  NNU_004690-RA 14 LAPGFKFAPTDEELIVYYLDEKTRDPTLRI-DTITEINIYQFDPQQLID 61
                   579***************************.88**************63 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-141262IPR003441NAC domain
PROSITE profilePS5100514.8611491IPR003441NAC domain
PfamPF023656.3E-71662IPR003441NAC domain
Gene3DG3DSA:2.40.50.1401.6E-45784IPR012340Nucleic acid-binding, OB-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MERKPWKNVK GIMLAPGFKF APTDEELIVY YLDEKTRDPT LRIDTITEIN IYQFDPQQLI  60
DGFEKLLTKT GETKDDSQLP TDETLPFADP E
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019052656.18e-24PREDICTED: NAC domain-containing protein 13-like
TrEMBLA0A1U8Q3Q12e-22A0A1U8Q3Q1_NELNU; NAC domain-containing protein 13-like
STRINGXP_010251982.13e-24(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34180.21e-12NAC domain containing protein 16