PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_007950-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

EIL

Protein Properties

Length: 401aa MW: 45191.7 Da PI: 5.1575

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_007950-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	146	5.2e-45	40	132	1	98
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 e+l++rmwkd+++lkr+ker+k ++ +++k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWk NNU_007950-RA 40 EDLERRMWKDRIKLKRIKERQKLAA--QQ---EKTKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWK 130 89***************999633..33...457889******************************************************** PP XX CS EIN3 97 ek 98 ek NNU_007950-RA 131 EK 132 *8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	1.3E-43	40	132	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MEHLLMVASV LGDSSDLDVD DIRCENLAEK DVSDEDIEAE DLERRMWKDR IKLKRIKERQ 60 KLAAQQEKTK PKQTSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG 120 ASDNIRAWWK EKEAAASSDS DYDVDGVDDG VGSASSNSKV DQRSQPMDTE PCEEPCNNSI 180 HPSNDKEQIK EQRRRKRPRG SSKSVNQQKE PPQNEDLHGD PRNVLPDMKQ RDLQLVGYQM 240 QIAQPENDPI SSLRPLENDL EIQPQLPESG LINPSAIPSA IETMSQSMFV DRRPLLYSAV 300 QNSGLPPRPN YIFYDPSAGY GLPQDKEQHE MGIADPQMRT EETGVHVPLL HGNANEITGG 360 DIGHYAVEPI IMEHRVSTAV MDHRPHLLLQ GGKWTFSNPL D

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MEHLLMVASV LGDSSDLDVD DIRCENLAEK DVSDEDIEAE DLERRMWKDR IKLKRIKERQ  60
KLAAQQEKTK PKQTSDQARR KKMSRAQDGI LKYMLKLMEV CKARGFVYGI IPEKGKPVSG  120
ASDNIRAWWK EKEAAASSDS DYDVDGVDDG VGSASSNSKV DQRSQPMDTE PCEEPCNNSI  180
HPSNDKEQIK EQRRRKRPRG SSKSVNQQKE PPQNEDLHGD PRNVLPDMKQ RDLQLVGYQM  240
QIAQPENDPI SSLRPLENDL EIQPQLPESG LINPSAIPSA IETMSQSMFV DRRPLLYSAV  300
QNSGLPPRPN YIFYDPSAGY GLPQDKEQHE MGIADPQMRT EETGVHVPLL HGNANEITGG  360
DIGHYAVEPI IMEHRVSTAV MDHRPHLLLQ GGKWTFSNPL D

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010257396.1	1e-151	PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X3
Swissprot	O23116	1e-53	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A1U7ZYI4	1e-150	A0A1U7ZYI4_NELNU; ETHYLENE INSENSITIVE 3-like 3 protein isoform X3
STRING	XP_010257394.1	1e-151	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	1e-54	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]