PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_008211-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 161aa    MW: 19281.6 Da    PI: 11.5035
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_008211-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.18.2e-135699548
                   CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48
                   +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+++
  NNU_008211-RA 56 RKQRRMISNRESARRSRMRKQKHLDELWSQVIRLRTENRQLIDK 99
                   79***************************************976 PP
2bZIP_126.11.9e-081011461863
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                    rrsR RK++ ++eL   v  L +eN++L+++l+++++  +++ +e+
  NNU_008211-RA 101 RRSRMRKQKHLDELWSQVIRLRTENRQLIDKLNHISECHDQVLQEN 146
                    9***********************************9999888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1052116IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3695496IPR004827Basic-leucine zipper domain
PfamPF001701.5E-105699IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.8E-115699No hitNo description
SuperFamilySSF579591.97E-1156100No hitNo description
CDDcd147021.87E-1157106No hitNo description
PROSITE patternPS0003605974IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-5101141No hitNo description
SuperFamilySSF579591.13E-5101137No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MQSNIPLYHL SRLLRPLPSP QIPPPVHEFN PQSSCLSSNS TSDEADEQQL RIIDERKQRR  60
MISNRESARR SRMRKQKHLD ELWSQVIRLR TENRQLIDKX RRSRMRKQKH LDELWSQVIR  120
LRTENRQLID KLNHISECHD QVLQENGPAQ RRSFRTATSA Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100107RRSRMRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021634785.11e-52basic leucine zipper 43-like
TrEMBLA0A2C9UKC83e-51A0A2C9UKC8_MANES; Uncharacterized protein
TrEMBLA0A443NEV45e-51A0A443NEV4_9MAGN; Basic leucine zipper 43-like protein
STRINGcassava4.1_022183m5e-52(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.12e-33basic leucine-zipper 42