PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_009041-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 282aa    MW: 32057.3 Da    PI: 4.6562
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_009041-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.4e-3081139259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+
  NNU_009041-RA  81 SDFWCWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRTDASMLIITYTSSHNHP 139
                    699***********************9988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.1E-3172141IPR003657WRKY domain
PROSITE profilePS5081130.88275141IPR003657WRKY domain
SuperFamilySSF1182902.35E-2578141IPR003657WRKY domain
SMARTSM007742.8E-3580140IPR003657WRKY domain
PfamPF031062.7E-2482139IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MGEETAVNKL QEQGQEEEEK ESQKRSTIDT ASSYAKANSK PSKDKKIENQ ASKRRKVVQK  60
TVVTVRIEAN SDRQKSEGPP SDFWCWRKYG QKPIKGSPYP RGYYRCSTSK GCSAKKQVER  120
CRTDASMLII TYTSSHNHPG PDLHTIDPNQ QSQPTPESQP TEELPATILQ QQQQQTITSE  180
EEEDAQENHL QYSQSPMDCS QDNPAKQEED PSTTEPEKTQ NSLNLLFDEN NPLSFPPLMT  240
FPTSKAEEND FFDELEELPI SSSLSGIMRS NFFDERILIL PF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-21811411779Disease resistance protein RRS1
5w3x_D2e-21811411779Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010259291.10.0PREDICTED: probable WRKY transcription factor 69
TrEMBLA0A1U7ZXN80.0A0A1U7ZXN8_NELNU; probable WRKY transcription factor 69
STRINGXP_010259291.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.16e-35WRKY DNA-binding protein 35