PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_010030-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

Trihelix

Protein Properties

Length: 86aa MW: 9115.01 Da PI: 4.6389

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_010030-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.8	1.2e-12	51	86	1	36
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+laL+++r+em+ ++r++ lk+plWeevs+ NNU_010030-RA 51 RWPRQETLALLKIRSEMDVAFRDSTLKGPLWEEVSR 86 8*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 86 aa Download sequence Send to blast
MLGVSGLTGN SSGGATDGNH EGEVGAVGSI AGGFGEEERG REGERNLAGN RWPRQETLAL 60 LKIRSEMDVA FRDSTLKGPL WEEVSR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010260937.1	7e-53	PREDICTED: trihelix transcription factor GT-2-like
TrEMBL	A0A1U8AF15	2e-51	A0A1U8AF15_NELNU; trihelix transcription factor GT-2-like
STRING	XP_010260937.1	3e-52	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	5e-19	Trihelix family protein