PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010292-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 144aa    MW: 16414 Da    PI: 10.1763
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010292-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.25e-131587465
            NAM  4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeekewyfFskrd 65
                    frF Pt +el+v+yL+kkv g ++     i++ d y+vePw+L              +vk++++ +yfF++ +
  NNU_010292-RA 15 SFRFLPTIQELIVYYLRKKVYGGRIVP-GLIDDYDAYSVEPWNLLGadrlmvagtkdkEVKKSNEALYFFVPLK 87
                   69**********************888.89**************73478888888776666666788***9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-2012141IPR003441NAC domain
PROSITE profilePS5100519.212144IPR003441NAC domain
PfamPF023651.6E-1115138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MKKMNCLGGR RILTSFRFLP TIQELIVYYL RKKVYGGRIV PGLIDDYDAY SVEPWNLLGA  60
DRLMVAGTKD KEVKKSNEAL YFFVPLKGSR SGDSDVKNHR GKVVGVTQSL VYNQYAKNGN  120
RCCKNALKID WIMHEHSLPN RTGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.18e-14NAC domain containing protein 28