PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_010910-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 241aa    MW: 27172.7 Da    PI: 4.9991
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_010910-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.52.4e-141057149
            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                   lppGfrF P+deelv++yL  k+++  ++   ++ +vd++ +ePw+Lp 
  NNU_010910-RA 10 LPPGFRFYPSDEELVCHYLYGKIAKGVVSK-GTMVDVDLHICEPWQLPG 57
                   79************************9888.88**************93 PP
2NAM447e-145710087129
            NAM  87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                    gkd++v++  +++ vg++ktLvfy++rap+g kt W+mhe+rle
  NNU_010910-RA  57 GKDRPVFDPaSRAIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 100
                    899****9966777***************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.4131118IPR003441NAC domain
SuperFamilySSF1019414.84E-378118IPR003441NAC domain
PfamPF023651.8E-141199IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    Send to blast
MGLRDIEATL PPGFRFYPSD EELVCHYLYG KIAKGVVSKG TMVDVDLHIC EPWQLPGKDR  60
PVFDPASRAI VGMRKTLVFY RNRAPNGIKT GWIMHEFRLE NPHMPPKEDW VLCRVFYKGK  120
GEHLTEPGLG NHEPETTIGA PSPTFAPFSH NHTVPSGYRQ VVDSFSSVLH HQDQSFLNLA  180
KQNPNFLGCP QEMNNTPMIE IDSRGGDEFG FLLDMSLEEN MGDGGTPSME EMKFDDDDNT  240
M
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262496.11e-179PREDICTED: NAC domain-containing protein 21/22-like
TrEMBLA0A1U8AJQ61e-178A0A1U8AJQ6_NELNU; NAC domain-containing protein 21/22-like
STRINGXP_010262496.11e-178(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-53NAC domain containing protein 74