PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_011051-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

G2-like

Protein Properties

Length: 78aa MW: 9062.23 Da PI: 11.0995

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_011051-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	31.2	5e-10	52	73	1	22
G2-like 1 kprlrWtpeLHerFveaveqLG 22 kpr++W+peLH+rF++a++qLG NNU_011051-RA 52 KPRRCWSPELHRRFLNALHQLG 73 79*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	3.0E-8	50	73	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 78 aa Download sequence Send to blast
MHDLNQKPSE IERKKGGGTF HPFQRDDKLT TPSIRTINGD NRGKAKSQTN RKPRRCWSPE 60 LHRRFLNALH QLGDTILD

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010263055.1	1e-31	PREDICTED: myb family transcription factor EFM-like isoform X1
Swissprot	Q9FPE8	1e-12	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A1U8ACC9	3e-30	A0A1U8ACC9_NELNU; myb family transcription factor EFM-like isoform X1
STRING	XP_010263055.1	4e-31	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	6e-15	G2-like family protein

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]