PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_011308-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family NAC
Protein Properties Length: 80aa    MW: 9402.76 Da    PI: 8.4227
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_011308-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.29.8e-1728036109
            NAM  36 evdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknratk....sgyWkatgkdkevlskkgelvglkktLvfy 109
                    evd+y+veP+ Lp +++++++   e y+F+ ++kk+++g+r+nr++k     g+W+at  dke+++ ++ lvg  k+Lvfy
  NNU_011308-RA   2 EVDVYNVEPQFLP-CTDGGDReikEHYYFTYKSKKSKNGSRPNRVVKnplgGGFWRATIADKEIYE-NDMLVGWMKMLVFY 80 
                    79***********.444444423378******************86667779**************.999**********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.867180IPR003441NAC domain
SuperFamilySSF1019411.7E-15280IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
MEVDVYNVEP QFLPCTDGGD REIKEHYYFT YKSKKSKNGS RPNRVVKNPL GGGFWRATIA  60
DKEIYENDML VGWMKMLVFY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010251353.12e-22PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A1U7ZRG86e-21A0A1U7ZRG8_NELNU; NAC domain-containing protein 101-like
STRINGXP_010251353.11e-21(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62700.14e-14Arabidopsis NAC domain containing protein 26