PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_012928-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

EIL

Protein Properties

Length: 497aa MW: 55633.9 Da PI: 4.5641

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_012928-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	173.8	1.8e-53	96	207	1	120
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWk 96 +el++rmwkd+++l+r+ker+k ++ ++ k +++++qarrkkmsraQDgiLkYMlk mevcna+GfvYgi+pekgkpv+g+sd++raWWk NNU_012928-RA 96 DELERRMWKDRVKLNRIKERQKLAA--QQ---EKPKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCNARGFVYGIVPEKGKPVSGSSDNIRAWWK 186 79***************999644..33...467999****************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 97 ekvefdrngpaaiskyqaknlils 120 ekv+fd+ngpaai+k+qa ++s NNU_012928-RA 187 EKVKFDKNGPAAIAKKQA---VAS 207 *************965...444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	3.4E-53	96	207	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0042762	Biological Process	regulation of sulfur metabolic process
GO:0071281	Biological Process	cellular response to iron ion
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence Send to blast
MVNFNTAWAA ALQTCGQKLT KMLCEASGIR DVSAASWKAE EEEGGEGVIT KLVCRLKEMA 60 DLEEIGAEIC SDLEVDDIRC DNLAEKDVSD EEIEADELER RMWKDRVKLN RIKERQKLAA 120 QQEKPKPKQT SDQARRKKMS RAQDGILKYM LKLMEVCNAR GFVYGIVPEK GKPVSGSSDN 180 IRAWWKEKVK FDKNGPAAIA KKQAVASSDS DYDVDGVDDG VGSVSSNPKV DRRIQPVNAG 240 PCGNPCDNPR HPSNDKEQSE EQPRRKRPRG RSKPVDQGTP SSQNEHLHGE ERSVVPDMNQ 300 VDLQLVEFQM QTTQLENDPV PSLRPLEEDQ DIQLQLPESA LNTFSDLPST NETTSESMLV 360 GDRPLLYSIV QNAELPPRPS YFFYDPSVGN RLHQDKEQLQ ISMADPQMMP EETGYHAPLL 420 HGNRNQIAGE EIHRYGKDSF HSEQDKPVES HYGSPLDGLS LDYGGFNSPF FGFDGTSSLD 480 ADLDFSLDDD LIQYFGA

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence Send to blast

MVNFNTAWAA ALQTCGQKLT KMLCEASGIR DVSAASWKAE EEEGGEGVIT KLVCRLKEMA  60
DLEEIGAEIC SDLEVDDIRC DNLAEKDVSD EEIEADELER RMWKDRVKLN RIKERQKLAA  120
QQEKPKPKQT SDQARRKKMS RAQDGILKYM LKLMEVCNAR GFVYGIVPEK GKPVSGSSDN  180
IRAWWKEKVK FDKNGPAAIA KKQAVASSDS DYDVDGVDDG VGSVSSNPKV DRRIQPVNAG  240
PCGNPCDNPR HPSNDKEQSE EQPRRKRPRG RSKPVDQGTP SSQNEHLHGE ERSVVPDMNQ  300
VDLQLVEFQM QTTQLENDPV PSLRPLEEDQ DIQLQLPESA LNTFSDLPST NETTSESMLV  360
GDRPLLYSIV QNAELPPRPS YFFYDPSVGN RLHQDKEQLQ ISMADPQMMP EETGYHAPLL  420
HGNRNQIAGE EIHRYGKDSF HSEQDKPVES HYGSPLDGLS LDYGGFNSPF FGFDGTSSLD  480
ADLDFSLDDD LIQYFGA

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00233	DAP	Transfer from AT1G73730	Download

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019054338.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	5e-64	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A1U8Q6A8	0.0	A0A1U8Q6A8_NELNU; ETHYLENE INSENSITIVE 3-like 3 protein
STRING	XP_010265828.1	0.0	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	1e-66	ETHYLENE-INSENSITIVE3-like 3

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]