PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_013614-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 196aa MW: 21702.2 Da PI: 8.5122

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_013614-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	26.9	1.1e-08	158	179	5	26
CHHHCHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka 26 + ++r+ kNRe+A rsR+RK++ NNU_013614-RA 158 RWQKRMLKNRESAARSRARKQE 179 569******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF07716	8.3E-6	157	181	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.62E-6	159	187	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.5E-7	160	184	No hit	No description
PROSITE pattern	PS00036	0	161	176	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence Send to blast
MEEVWKDINL TSLNDHHAAV AATGTRESTL PKVSNTDTTN FRGMIFQDFL ARPFNTIDPP 60 TSIVSVNPTT SSDVTTFTSP PPRPPTVLSL NSGPEFHYLD NTDSLRPHLQ LYGSGNATAT 120 PLFLPSLNAP FDSFGSSSAF SPFCQKRVPD TNENSGDRWQ KRMLKNRESA ARSRARKQEF 180 IFSISSSQST LLFVSR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010266761.1	1e-142	PREDICTED: protein FD-like
TrEMBL	A0A1U8AL69	1e-140	A0A1U8AL69_NELNU; protein FD-like
STRING	XP_010266761.1	1e-141	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	3e-22	bZIP family protein