PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_013769-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bZIP
Protein Properties Length: 250aa    MW: 27120.2 Da    PI: 10.0158
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_013769-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.56.8e-09203226427
                    XCHHHCHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkae 27 
                    ++r +r++kNRe+A rsR+RK++ 
  NNU_013769-RA 203 DRRHKRMIKNRESAARSRARKQEI 226
                    689*******************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.3E-6195225No hitNo description
CDDcd147073.07E-14204228No hitNo description
SuperFamilySSF579599.56E-6204228No hitNo description
PfamPF001701.9E-6204227IPR004827Basic-leucine zipper domain
PROSITE patternPS000360207222IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MWSSSGGEET NNLNGKRVSS SSSKSSSSSS SPSPFAPQSH FLTPRRKTME QVWKDINLAS  60
TSLSDHHATR EPLLPKSTTT TSSATAFRGV ILQDFLARPF SKDPPTSSVI SVDPTTASDV  120
AVFGSPAPPP PTVLSLNSGP EFHYLENTTD PLRSQSQLYT PGNSATPFFL SSLNTPFDPF  180
APSSAFSSFC KKRVPESDDS SGDRRHKRMI KNRESAARSR ARKQEIISLF SLSPTHPPPP  240
LALESSCLYK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010266850.11e-176PREDICTED: protein FD-like isoform X1
TrEMBLA0A1U8AI551e-174A0A1U8AI55_NELNU; protein FD-like isoform X1
STRINGXP_010266850.11e-175(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.13e-31bZIP family protein