PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_014482-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

bZIP

Protein Properties

Length: 138aa MW: 15808.9 Da PI: 9.6791

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_014482-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.7	3.5e-15	23	82	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++ +r+ +NRe+ArrsR+RK++ +e L++ v +L++ N + ++++ +++++ + s++ NNU_014482-RA 23 DRKRKRMLSNRESARRSRARKQQHLEDLTKQVSQLQKDNNEITQRINAITQLYLQISSQN 82 7899*************************************************9999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.0E-16	20	84	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.174	22	85	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.8E-11	24	78	No hit	No description
SuperFamily	SSF57959	1.62E-12	24	78	No hit	No description
Pfam	PF00170	2.9E-11	24	82	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.01E-8	25	75	No hit	No description
PROSITE pattern	PS00036	0	27	42	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 138 aa Download sequence Send to blast
MSTVKQNVSS GSEGDPKSVL IDDRKRKRML SNRESARRSR ARKQQHLEDL TKQVSQLQKD 60 NNEITQRINA ITQLYLQISS QNNILRAQEM ELEDRLNSLK SVIRECQSFC PEALDAKPWS 120 LPFQSVPIIA AAADMFSY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	43	RRSRARKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019054584.1	1e-97	PREDICTED: bZIP transcription factor 53
TrEMBL	A0A1U8Q704	3e-96	A0A1U8Q704_NELNU; bZIP transcription factor 53
STRING	XP_010267999.1	5e-97	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	1e-27	basic region/leucine zipper motif 53