PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_014889-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 410aa    MW: 44907.3 Da    PI: 9.4968
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_014889-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.41.3e-06181203223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     CpdCg++F+  +nL+ H+   H
  NNU_014889-RA 181 ACPDCGEVFPKTENLELHQAIrH 203
                    6******************9877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.933180208IPR007087Zinc finger, C2H2
PROSITE patternPS000280180203IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.90.228.103.3E-14205407IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563996.23E-26205407No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MKERVRSATL LFYLLALLFM AVSTFFQTTS TEKQQHSKRK RKQQKQPSSW DQIKSLLTCK  60
QIEGSQVHDP SKNVGGYSKL GASCSSICSF KDVVHGNTRV VHRADNSPES SSVCQETALL  120
SRKSVARSSN RPSSGSTRPS GGGAYSSSSR GMQLRKLSGC YECHMIVDPA RFPSPRTTIC  180
ACPDCGEVFP KTENLELHQA IRHAVTELGP EDSGRNIVEI IFKSSWLKKD NPLCKIERIL  240
KVHNTQRTIQ RFEDCRDAVK ARVSNNTKKN PRCAADGNEL LRFHCTTLSC ALGARGTTSL  300
CGSIPGCGVC TIIRHGFPGK VQEGKGVRTT ASSGRAHDSL GSVEGRRAML VCRVIAGRVK  360
RVADDVATEE EGVYDSVAGY AGVYTNLEEL IVFNPRAILP CFVVIYKALD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010268701.10.0PREDICTED: uncharacterized protein LOC104605577
TrEMBLA0A1U8AZT30.0A0A1U8AZT3_NELNU; uncharacterized protein LOC104605577
STRINGXP_010268701.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-168C2H2-like zinc finger protein