PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_017396-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

NAC

Protein Properties

Length: 104aa MW: 11681.2 Da PI: 9.8844

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_017396-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	39.7	1.5e-12	12	91	55	128
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy.....kg.rapkgektdWvmheyrl 128 ++ ++fF++ ++k +g + + + Wka+ d v++ +g++vgl k+Lv+y g + ++++kt W+++e++l NNU_017396-RA 12 NEALHFFVSLKRKCVNGCGPDHRAGDELWKASSGDSYVKDDRGKVVGLTKSLVYYqyrkeGGrSCKDASKTYWIINEFSL 91 3467***********999998999*************************44432121345566*******97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	16.014	1	104	IPR003441	NAC domain
SuperFamily	SSF101941	1.18E-12	13	96	IPR003441	NAC domain
Pfam	PF02365	1.3E-4	16	91	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence Send to blast
MAGVNQEGKK CNEALHFFVS LKRKCVNGCG PDHRAGDELW KASSGDSYVK DDRGKVVGLT 60 KSLVYYQYRK EGGRSCKDAS KTYWIINEFS LSNRPRQAKQ SVTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	6e-10	NAC domain containing protein 36