PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022300-RA
Organism
Nelumbo nucifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family BES1
Protein Properties Length: 257aa    MW: 27833.3 Da    PI: 9.6302
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022300-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822125.28.4e-39461538110
         DUF822   8 twkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.....eeaeaagssasaspesslqssl 98 
                    ++ E+E++k RER+RRai++ki+ GLR++G+y+lp raD+n+Vl+ L+reAGwvve+DGttyr+ s+ +      ++ a+ + ++ + + s+  + 
  NNU_022300-RA  46 SASEKERTKMRERQRRAITTKIFNGLRKHGGYNLPPRADINDVLRELAREAGWVVEPDGTTYRATSSTTtittpPNMVAMEQVSHFQSCCSTCITG 141
                    678************************************************************877766555444566666666666666655666 PP

         DUF822  99 kssalaspvesy 110
                    k s +++p++s 
  NNU_022300-RA 142 KGSGTPTPTSSF 153
                    777777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.5E-3547155IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MKQEPERKAY SSEVVRRERE AEIEMKEATK GLTSEEKVAI GMIGRSASEK ERTKMRERQR  60
RAITTKIFNG LRKHGGYNLP PRADINDVLR ELAREAGWVV EPDGTTYRAT SSTTTITTPP  120
NMVAMEQVSH FQSCCSTCIT GKGSGTPTPT SSFGGGTGGD CSTTASPRHA TFYDATPPRA  180
GPGCGGNGSV PTSYLGSHFG MPYARSVPGI GVGAMPHLST AQSLAFMMPQ QHQQLYFQET  240
RASNQITPVA SPQQRRT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-1162108391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-1162108391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-1162108391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-1162108391437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241187.10.0PREDICTED: protein BZR1 homolog 3-like
TrEMBLA0A1U7YTW70.0A0A1U7YTW7_NELNU; protein BZR1 homolog 3-like
STRINGXP_010241187.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.13e-22beta-amylase 7