PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_022541-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

Trihelix

Protein Properties

Length: 88aa MW: 9131.05 Da PI: 4.5054

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_022541-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.6	2.8e-12	53	88	1	36
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevsk 36 rW++qe+laL+++r+em+ ++r++ lk+plWeevs+ NNU_022541-RA 53 RWPRQETLALLKIRSEMGVAFRDSTLKGPLWEEVSR 88 8*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence Send to blast
MLGVSGLLGN SGGGATDGSH EDEVGVAGAI AGGFGEEDKG KAEEGERNSA GSRWPRQETL 60 ALLKIRSEMG VAFRDSTLKG PLWEEVSR

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010241710.1	1e-53	PREDICTED: trihelix transcription factor GT-2-like
TrEMBL	A0A1U7YV28	2e-52	A0A1U7YV28_NELNU; trihelix transcription factor GT-2-like
STRING	XP_010241710.1	4e-53	(Nelumbo nucifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	6e-19	Trihelix family protein