PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

NNU_023112-RA

Organism

Nelumbo nucifera

Taxonomic ID

4432

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo

Family

NAC

Protein Properties

Length: 114aa MW: 12806.8 Da PI: 7.056

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
NNU_023112-RA	genome	CAS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	33.6	1.1e-10	16	43	1	28
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkl 28 lppGfrFhPtdeel+++yL kk+ +kl NNU_023112-RA 16 LPPGFRFHPTDEELITHYLSKKAILSKL 43 79*******************9866664 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-10	12	45	IPR003441	NAC domain
Pfam	PF02365	8.7E-8	17	52	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 114 aa Download sequence Send to blast
MENVSGLNME EEQIDLPPGF RFHPTDEELI THYLSKKAIL SKLRVGCQIG GEIPNPQNVC 60 LFPTMTSTKE RRGGDTINHP SSLRSLSFQI ERGSFPLLKL YMLVGSTLHI PMSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	2e-15	NAC domain containing protein 100