PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Neem_14072_f_1

Organism

Azadirachta indica

Taxonomic ID

124943

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta

Family

Nin-like

Protein Properties

Length: 98aa MW: 10855.5 Da PI: 10.6576

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Neem_14072_f_1	genome	NGD	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	40.4	5.7e-13	52	89	10	47
RWP-RK 10 lskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47 l +y ++++kdAA++Lgvc+ +LKr C q I+ Ph Neem_14072_f_1 52 LGQYCAGSLKDAANSLGVCPATLKRFCKQQEISKGPHQ 89 789******************************99996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02042	9.3E-11	52	89	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 98 aa Download sequence Send to blast
MVNFDSLNDR GNVNVVNGIH NLVASPENRS AGKILERKRG RKRKSTVLEL FLGQYCAGSL 60 KDAANSLGVC PATLKRFCKQ QEISKGPHQL MQYSRTPP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006476342.1	9e-21	protein NLP7
TrEMBL	A0A2H5NHG8	2e-19	A0A2H5NHG8_CITUN; Uncharacterized protein (Fragment)
STRING	XP_006476342.1	4e-20	(Citrus sinensis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-16	Nin-like family protein