PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_14380_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family ERF
Protein Properties Length: 90aa    MW: 10437.8 Da    PI: 10.5452
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_14380_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2301.3e-094672232
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfs 32
                    +y+GVr+++ +g+WvAeIr+p +   r+ f 
  Neem_14380_f_1 46 RYRGVRQRR-WGKWVAEIREPHN---RREFG 72
                    7*****998.**********733...25555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103210.5864690IPR001471AP2/ERF domain
PfamPF008471.5E-54671IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-94668IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-64669IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MAVTEEPTSN ITTLPTTATT TTVTVPTTPS TESSVSYKET GEQRRRYRGV RQRRWGKWVA  60
EIREPHNRRE FGLEHLIQQK QQPELTMKPL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001315868.11e-17ethylene-responsive transcription factor ABR1-like
RefseqXP_008372740.21e-17ethylene-responsive transcription factor ABR1-like isoform X1
TrEMBLA0A498JXU93e-16A0A498JXU9_MALDO; Uncharacterized protein
TrEMBLF8TVR33e-16F8TVR3_MALDO; Ethylene response factor 3
STRINGXP_008372740.15e-17(Malus domestica)