PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Neem_16435_f_1
Organism
Azadirachta indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Meliaceae; Azadirachta
Family bZIP
Protein Properties Length: 101aa    MW: 11879.6 Da    PI: 10.2429
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Neem_16435_f_1genomeNGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.71.1e-121772661
                    HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                     e r+ kNReAArrsR++K +++  L +++  L+ +  aLkk++ e++ke+ ++ +
  Neem_16435_f_1 17 EEERRRKNREAARRSRAKKDEKVRILIDEISMLQVQIGALKKKIGEIEKEYHNVSM 72
                    6889***********************************************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502179.911477IPR004827Basic-leucine zipper domain
SMARTSM003384.3E-71576IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.38E-91770No hitNo description
PfamPF001701.6E-91872IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-101871No hitNo description
PROSITE patternPS0003602034IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MSTSSGFKSD CEATKTEEER RRKNREAARR SRAKKDEKVR ILIDEISMLQ VQIGALKKKI  60
GEIEKEYHNV SMQRNSLKAE QKELNERLQS TEIYTVFFNK L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11929RRRKNREAARR
22835RRSRAKKD